Publications

Research articles and preprints. My name is highlighted in the author lists.

Hidden genetic diversity in 320 nearly-complete East Asian genome assemblies

D. Wu, C. Yang, Q. Chen, et al.

Nature (Accepted) 2026

Co-first author.

DOI

A near telomere-to-telomere genome assembly of the Amur stickleback (Pungitius sinensis) reveals structural variation and parallel evolution of sticklebacks

B. H. Chen, D. Y. Wu, D. Yu, W. Dai, Q. Chen, et al.

Zoological Research 2026

DOI

Contrasting selective pressures shape human pepsinogen A gene copy-number variation across Eurasia

Q. Chen, F. Wang, A. Liu, Z. Zhu, H. Wang, X. Li, D. Wu, G. Zhang

2026

First author.

DOI

Deciphering complete archaic introgression sequences in modern human genomes

M. Suo, A. Bi, Q. Chen, et al.

2026

Co-first author.

DOI

Multidimensional variation and population stratification across 8000 complete human centromeres

Y. Sun, S. Wan, L. Nie, D. Yu, F. Zhou, Y. Yang, X. Yang, A. Liu, Q. Chen, et al.

2026

DOI

Origin and structural evolution of the complex genomic regions of human Y chromosome

J. Liu, Q. Ni, Y. Zhang, Q. Chen, D. Yu, C. Yang, D. Wu, G. Zhang, Q. Zhou

2026

DOI

PanSVmerger: a flexible pipeline for merging multiallelic structural variants in pangenome graphs

T. Yang, J. Shi, Q. Chen, D. Wu, X. Tan, J. Ruan, C. Yang

2026

DOI

Genetic diversity and evolution of rice centromeres

L. Xie, Y. Huang, W. Huang, L. Shang, Y. Sun, Q. Chen, et al.

Nature Genetics 2025

DOI

GCI: a continuity inspector for complete genome assembly

Q. Chen, C. Yang, G. Zhang, D. Wu

Bioinformatics 2024

First author.

DOICode